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Gene and Nucleic Acid Resources

General gene and nucleic acid resources

RNA-specific resources

 

General gene and nucleic acid resources

  • BioGPS Gene Portal System
  • COSMIC Catalogue of Somatic Mutations in Cancer
  • DDBJ DNA DataBank of Japan
  • DECIPHER database of submicroscopic chromosomal imbalance
  • EMBL nucleotide sequence database
  • GENATLAS database of human genes
  • Gene Wiki dedicated to the goal of applying community intelligence to the annotation of gene and protein function
  • GeneCards database of human genes
  • GeneTests disease profile database
  • GenomeNet Database Resources
  • GHR Genetics Home Reference
  • HGMD Human Gene Mutation Database
  • HGVS database list Human Genome Variation Society
  • IMGT/GENE-DB the international ImMunoGeneTics information system for immunoglobulins
  • KEGG Kyoto Encyclopedia of Genes and Genomes
  • NCBI GenBank
  • OMIA Online Mendelian Inheritance In Animals
  • OMIM Online Mendelian Inheritance in Man
  • Pseudogene.org genome analysis
  • RepBase database of repetitive DNA elements
  • TGI The Gene Index project
  • UniGene unique human gene sequence collection
  • Wikigenes

RNA-specific resources

  • antiCODE database of non-redundant natural sense-antisense transcript pairs
  • Genomic tRNA database contains tRNA gene predictions made by tRNAscan-SE
  • lncRNAdb provides comprehensive annotations of eukaryotic long non-coding RNAs (lncRNAs)
  • Mamit-tRNAdb compilation of mammalian mitochondrial tRNA genes
  • miRBase microRNA database
  • NATsDB repository of natural antisense transcripts (NATs)
  • ncRNA Expression Database (NRED) database of expression data on human and mouse long ncRNAs
  • Non-coding RNA Database
  • piRNABank web resource on classified and clustered piRNAs
  • Rfam RNA families database of alignments and CMs
  • snoRNABase comprehensive database of human H/ACA and C/D box snoRNAs
  • Sno/scaRNAbase curated repository for small nucleolar RNAs and small cajal body-specific RNAs
  • TarBase curated database of experimentally supported microRNA targets