This Hot Topic is now closed
Thank you to all who responded on potentially offensive gene names, we
received an overwhelming response and based on the results the HGNC has
decided on the following:
Option 2: Gene symbols will remain the same and, where appropriate, gene names
will be modified to a non-offensive form.
For example, the LFNG gene previously had the gene name "lunatic fringe
homolog (Drosophila)" and has since been renamed as "LFNG O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase".
As usual all previous gene names and aliases will be retained within the
record to keep historical references and to enable cross-database searches.
A new Hot Topic will be announced in the New Year and we would welcome your suggestions for possible future topics at hgnc@genenames.org.
Should potentially offensive gene
names be changed?
How would you feel if you were told you carried a mutation in the gene ‘Lunatic Fringe homolog (Drosophila)'? Two percent of human genes are named based on their known ortholog or paralog in Drosophila; some of these Drosophila genes have whimsical names such as "lunatic fringe". The nomenclature guidelines(1) have for many years stated that symbols should not be offensive. There is currently no specific instruction about names, although in practice this is certainly considered when new names and symbols are approved, including (as far as we know) the avoidance of symbols that are offensive in other languages.
Recently, correspondence in the American Journal of Medical Genetics has discussed a number of well-established approved names and symbols both for genes and for syndromes as being and have recently been ‘inappropriate, demeaning and pejorative' in humans(2-4). The table shown here indicates the gene symbols and names which have been most criticised.
|
|
Approx. times symbol used in PubMed |
| Gene Symbol |
Gene Name |
All Species |
Human |
| LFNG |
lunatic fringe homolog (Drosophila) |
94 |
31 |
| MFNG |
manic fringe homolog (Drosophila) |
29 |
24 |
| RFNG |
radical fringe homolog (Drosophila) |
38 |
24 |
| SHH |
sonic hedgehog homolog (Drosophila) |
1472 |
581 |
| IHH |
Indian Hedgehog homolog (Drosophila) |
294 |
112 |
Of these, the easiest to change would be those in the fringe series, bearing in mind that the function of the proteins coded by the fringe genes are now known. They are all enzymes of the Notch pathway: O-fucose beta1,3-N-acetylglucosaminyltransferase, elongates O-fucose on specific EGF repeats from Notch to form a disaccharide that can be further elongated to a tetrasaccharide.
So should potentially offensive gene names be changed? Please select which option you prefer from below and add any comments on this issue or suggestions for other genes we should consider.
References
1: Wain HM, Lovering RC, Bruford EA, Lush MJ Wright MW, Povey S. Guidelines for Human Gene Nomenclature. Genomics. 2002 Apr;79(4):464-70. PMID:11944974
2: Ludman MD. The use of inappropriate, demeaning, and pejorative terminology in gene nomenclature: a comment on Feingold. Am J Med Genet A. 2006 Jul 1;140(13):1485-6. PMID:16691585
3: Feingold M. The use of inappropriate, demeaning, and pejorative terminology to describe syndromes. Am J Med Genet A. 2006 Feb 15;140(4):410-1; discussion 412. PMID:16419131
4: Cohen M. Problems in the naming of genes. J Med Genet A. 2006 Jul 1;140(13):1483-4. PMID:16718675
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