Gene Family: Competing endogenous long non-coding RNAs (CERNA)
Competing endogenous RNA: In molecular biology, competing endogenous RNAs (abbreviated ceRNAs) regulate other RNA transcripts by competing for shared microRNAs. [Source: Wikipedia]
Genes contained within the family: 18
| Approved Symbol | Approved Name | Previous Symbols | Synonyms | Chromosome |
|---|---|---|---|---|
| CCAT1 | colon cancer associated transcript 1 (non-protein coding) | CARLo-5, onco-lncRNA-40 | 8q24.21 | |
| CERNA1 | competing endogenous lncRNA 1 for miR-4707-5p and miR-4767 | LOC100129973 | 15q21.2 | |
| CERNA2 | competing endogenous lncRNA 2 for microRNA let-7b | HOST2 | 10q23.1 | |
| CERNA3 | competing endogenous lncRNA 3 for miR-645 | CTA | 8q12.1 | |
| EWSAT1 | Ewing sarcoma associated transcript 1 | TMEM84, NCRNA00277, LINC00277 | FLJ33768 | 15q23 |
| HOTAIR | HOX transcript antisense RNA | HOXC-AS4, HOXC11-AS1, NCRNA00072 | 12q13.13 | |
| HULC | hepatocellular carcinoma up-regulated long non-coding RNA | NCRNA00078, LINC00078, HCCAT1 | 6p24.3 | |
| LINCMD1 | long intergenic non-protein coding RNA, muscle differentiation 1 | MIR133BHG, LINC-MD1 | 6p12.2 | |
| LINC-ROR | long intergenic non-protein coding RNA, regulator of reprogramming | lincRNA-RoR, lincRNA-ST8SIA3, ROR | 18q21.31 | |
| LINC01133 | long intergenic non-protein coding RNA 1133 | 1q23.2 | ||
| MALAT1 | metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) | PRO1073, MALAT-1, NCRNA00047, HCN, NEAT2, LINC00047, mascRNA | 11q13.1 | |
| MHENCR | melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489 | 20q13.33 | ||
| PCA3 | prostate cancer associated 3 (non-protein coding) | DD3, NCRNA00019, PCAT3 | 9q21.2 | |
| SNHG1 | small nucleolar RNA host gene 1 | UHG, NCRNA00057, LINC00057, lncRNA16 | 11q12.3 | |
| TUG1 | taurine up-regulated 1 (non-protein coding) | FLJ20618, NCRNA00080, LINC00080 | 22q12.2 | |
| TUSC7 | tumor suppressor candidate 7 (non-protein coding) | NCRNA00295, LSAMP-AS3 | LINC00902, LOC285194 | 3q13.31 |
| UCA1 | urothelial cancer associated 1 (non-protein coding) | LINC00178, CUDR, UCAT1, onco-lncRNA-36 | 19p13.12 | |
| ZEB1-AS1 | ZEB1 antisense RNA 1 | 10p11.22 |
Note that only lncRNAs that function as ceRNAs are listed here, not transcribed pseudogenes or mRNA transcripts of protein-coding genes.
