Virtual Gene Nomenclature Workshop Chromosome Y

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There are no genes without sequence on this chromosome. Genes that now have sequence are shown in green. The locus type of some genes have been redefined as phenotypic loci, these are shown in blue. Please email the Nomenclature Editor Mathew Wright for further information, or to offer your help with these genes.

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The following 2 loci have no sequence available, some of these have been given an alternative classification:

Approved Symbol	Gene Name	Chromosomal Location	PubMed ID	Entrez Gene ID	Locus Type	Date Approved
AZF1	azoospermia factor 1	Yq11		560	phenotype
AZF2	azoospermia factor 2	Y		561	phenotype	06/03/1995

The following genes now have sequence data associated with them:

Approved Symbol	Gene Name	Chromosomal Location	PubMed ID	Entrez Gene ID	Locus Type	Accession ID
ACTGP2	actin, gamma pseudogene 2	Yq11		74	pseudogene	AC007742
ARSDP	arylsulfatase D pseudogene	Y	8845834	10034	pseudogene	AC002992
ASSP6	argininosuccinate synthetase pseudogene 6	Y	6093508	451	pseudogene	AC012502
CD24L4	CD24 antigen-like 4	Y	7959762	938		XM_212340
KALP	Kallmann syndrome sequence pseudogene	Yq11		3734	pseudogene	X68743
RVNP2	retroviral sequences NP2	Y	3600636	6255		M15971
STSP	steroid sulfatase (microsomal) pseudogene	Yq11	3203382	6803	pseudogene	M23946
SEDLP3	spondyloepiphyseal dysplasia, late, pseudogene 3	Yq11.23	11031107	27195	pseudogene	AC007742
SEDLP4	spondyloepiphyseal dysplasia, late, pseudogene 4	Yq11.23	11031107	27194	pseudogene	AC007965
SEDLP5	spondyloepiphyseal dysplasia, late, pseudogene 5	Yq11.23	11031107	27193	pseudogene	AC010682
SEDLP6	spondyloepiphyseal dysplasia, late, pseudogene 6	Yq11.23	11031107	27192	pseudogene	AC009235
SEDLP7	spondyloepiphyseal dysplasia, late, pseudogene 7	Yq11.23	11031107	27191	pseudogene	AC00737 9

The following genes have sequence that will soon be identified by analysis of the Y chromosome:

RBMY1A2	RNA binding motif protein, Y chromosome, family 1, member A2	Yq11.23	9598316	5941	04/06/1998
RBMY1G	RNA binding motif protein, Y chromosome, family 1, member G	Yq11.23	9598316	5943	04/06/1998
RBMY2A	RNA binding motif protein, Y chromosome, family 2, member A	Yq11.23	9598316	5945	04/06/1998

Thanks to Youla Karavidopoulos and others who have helped to find sequence for these genes.

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Maintained by hgnc@genenames.org

Last updated: September 2003