Virtual Gene Nomenclature Workshop Chromosome 6
This is an archived page. The information displayed has not been updated.
There were 89 genes without sequence on this chromosome, there are now 23.
Many thanks to Steve Marsh (Anthony Nolan Research Institute), Grant Sutherland (Women's and Children's Hospital, Australia) and Youla Karavidopoulou (European Bioinformatics Institute) for their help with this workshop.
Please email the Nomenclature Editor Ruth Lovering for further information, or to offer your help with these genes.
The following 23 loci have no sequence available, some of these have been given an alternative classification
|
Approved Symbol |
Gene Name |
Chromosomal Location |
PubMed ID |
Entrez Gene ID |
Locus Type |
Date Approved |
|
ADCP1 |
adenosine deaminase complexing protein 1 |
6 |
|
106 |
gene |
|
|
BEVI |
baboon M7 virus integration site |
6 |
|
628 |
region |
|
|
BTNL1 |
butyrophilin-like 1 |
6p21.3 |
8114113
|
697 |
non-human ortholog |
11/10/1995
|
|
FIM1 |
Friend-murine leukemia virus integration site 1 homolog |
6p23-p22.3 |
|
2278 |
region |
24/04/1989
|
|
FRA6A |
fragile site, folic acid type, rare, fra(6)(p23) |
6p23 |
|
2401 |
region |
|
|
FRA6B |
fragile site, aphidicolin type, common, fra(6)(p25.1) |
6p25.1 |
|
2402 |
region |
|
|
FRA6C |
fragile site, aphidicolin type, common, fra(6)(p22.2) |
6p22.2 |
|
2403 |
region |
|
|
FRA6D |
fragile site, BrdU type, common, fra(6)(q13) |
6q13 |
|
2404 |
region |
|
|
FRA6E |
fragile site, aphidicolin type, common, fra(6)(q26) |
6q26 |
|
2405 |
region |
|
|
FRA6F |
fragile site, aphidicolin type, common, fra(6)(q21) |
6q21 |
|
2406 |
region |
|
|
FRA6G |
fragile site, aphidicolin type, common, fra(6)(q15) |
6q15 |
|
2407 |
region |
01/06/1989
|
|
GLYS1 |
glycosuria 1, renal |
6p21.3 |
|
2759 |
phenotype |
26/01/1993
|
|
IBD3 |
inflammatory bowel disease 3 |
6p |
10577918
|
30829 |
phenotype |
15/11/2000
|
|
IGLP1 |
immune response to synthetic polypeptides 1 |
6p21.3 |
|
7925 |
phenotype |
08/05/2000
|
|
IGLP2 |
immune response to synthetic polypeptides 2 |
6p21.3 |
|
7926 |
phenotype |
08/05/2000
|
|
LAKL |
lymphokine-activated killer cell ligand |
6 |
|
3905 |
phenotype |
08/08/1991
|
|
LPAL1 |
lipoprotein, Lp(a)-like 1 |
6q26-q27 |
7679504
|
4019 |
unknown |
12/12/1994
|
|
PBCRA1 |
progressive bifocal chorioretinal atrophy 1 |
6q |
9719369
|
7948 |
phenotype |
20/08/1999
|
|
SEN6 |
senescence (cellular)-related 6 |
6q26-q27 |
8706800
|
6411 |
gene |
07/07/1997
|
|
SEN6A |
senescence (cellular)-related 6A |
6q14-q21 |
8570202
|
6412 |
gene |
07/07/1997
|
|
SEN6B |
senescence (cellular)-related 6B |
6q21-q22 |
7520270
|
6413 |
gene |
07/07/1997
|
|
ST4 |
suppression of tumorigenicity 4 (malignant melanoma) |
6q |
1680551
|
6763 |
phenotype |
13/06/1990
|
|
ST8 |
suppression of tumorigenicity 8 (ovarian) |
6q25-q27 |
1394208
|
6765 |
phenotype |
11/07/1997
|
The following 56 genes now have sequence data associated.
|
Approved Symbol |
Gene Name |
Chromosomal Location |
PubMed ID |
Entrez Gene ID |
Locus Type |
Date Approved |
|
ACTBP8 |
actin, beta pseudogene 8 |
6q13 |
6296793
|
68 |
pseudogene |
13/12/1995
|
|
AIM1 |
absent in melanoma 1 |
6q21 |
|
202 |
gene |
12/06/1997
|
|
ASSP1 |
argininosuccinate synthetase pseudogene 1 |
6 |
6093508
|
446 |
pseudogene |
01/01/1986
|
|
ASSP2 |
argininosuccinate synthetase pseudogene 2 |
6 |
6093508
|
447 |
pseudogene |
|
|
C6orf1 |
chromosome 6 open reading frame 1 |
6p21.3 |
10036196 |
897 |
pseudogene |
10/12/1991 |
|
CCND3P |
cyclin D3 pseudogene |
6p21 |
1386335 |
1546371 |
pseudogene |
12/08/1999 |
|
CLDN20 |
claudin 20 |
6q25 |
|
49861 |
gene |
15/03/2000
|
|
CLNS1B |
chloride channel, nucleotide-sensitive, 1B |
6q12.1-q13 |
|
1204 |
gene |
16/10/1997
|
|
COL12A1 |
collagen, type XII, alpha 1 (previous symbol COL12A1L) |
6 |
1427837
|
1304 |
gene |
20/10/1992
|
|
COX5BL2 |
cytochrome c oxidase subunit Vb-like 2 |
6 |
|
1331 |
gene |
06/06/1991
|
|
DBIL2 |
diazepam binding inhibitor-like 2 (pseudogene) |
6 |
|
1624 |
pseudogene |
24/07/1991
|
|
DHFRP2 |
dihydrofolate reductase pseudogene 2 |
6 |
|
1721 |
pseudogene |
|
|
ETF1P1 |
eukaryotic translation termination factor 1 pseudogene 1 |
6p21.3 |
1546371 |
6824 |
pseudogene |
12/08/1999 |
|
FGFR6 |
fibroblast growth factor receptor 6 |
6p21.3 |
8307783 |
2265 |
gene |
17/05/1994 |
|
FUCA2 |
fucosidase, alpha-L- 2, plasma |
6 |
|
2519 |
gene |
|
|
GAPDL8 |
glyceraldehyde-3-phosphate dehydrogenase-like 8 |
6p21-qter |
|
2605 |
pseudogene |
|
|
GJA1 |
gap junction protein, alpha 1, 43kDa (connexin 43) (previous symbol GJAL) |
6q16-q22 |
|
2704 |
gene |
06/02/1990
|
|
GPR53P |
G protein-coupled receptor 53, pseudogene |
6p21 |
9931487 |
9292 |
pseudogene |
12/03/1999 |
|
HLA-DPB2 |
major histocompatibility complex, class II, DP beta 2 (pseudogene) |
6p21.3 |
. |
3116 |
pseudogene |
. |
|
HLA-DQB2 |
major histocompatibility complex, class II, DQ beta 2 |
6p21.3 |
. |
3120 |
gene |
. |
|
HLA-DQB3 |
major histocompatibility complex, class II, DQ beta 3 |
6p21.3 |
1529427 |
3121 |
pseudogene |
. |
|
HLA-DRB2 |
major histocompatibility complex, class II, DR beta 2 |
6p21.3 |
3032786
|
3124 |
pseudogene |
|
|
HLA-DRB6 |
major histocompatibility complex, class II, DR beta 6 (pseudogene) |
6p21.3 |
1529427
|
3128 |
pseudogene |
25/06/1992
|
|
HLA-DRB7 |
major histocompatibility complex, class II, DR beta 7 (pseudogene) |
6p21.3 |
1529427
|
3129 |
pseudogene |
25/06/1992
|
|
HLA-DRB8 |
major histocompatibility complex, class II, DR beta 8 (pseudogene) |
6p21.3 |
1529427
|
3130 |
pseudogene |
25/06/1992
|
|
HLA-DRB9 |
major histocompatibility complex, class II, DR beta 9 (pseudogene) |
6p21.3 |
1529427
|
3132 |
pseudogene |
25/06/1992
|
|
HLA-H |
major histocompatibility complex, class I, H (pseudogene) |
6p21.3 |
1517564
|
3136 |
pseudogene |
01/08/1991
|
|
HLA-J |
major histocompatibility complex, class I, J (pseudogene) |
6p21.3 |
|
3137 |
pseudogene |
25/06/1992
|
|
HLA-K |
major histocompatibility complex, class I, K |
6p21.3 |
|
3138 |
pseudogene |
02/11/1993 |
|
HLA-L |
major histocompatibility complex, class I, L |
6p21.3 |
|
3139 |
pseudogene |
02/11/1993 |
|
GCNT2 |
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (previous symbol II) |
6pter |
2791656
|
3528 |
gene |
01/08/1990
|
|
EIF3S6P1 |
eukaryotic translation initiation factor 3, subunit 6 48kDa pseudogene 1 (previous symbol INT6P1) |
6q |
9403073
|
3647 |
pseudogene |
11/07/1997
|
|
KRAS1P |
v-Ki-ras1 Kirsten rat sarcoma 1 viral oncogene homolog, processed pseudogene |
6p12-p11 |
|
3844 |
pseudogene |
|
|
KRT18P1 |
keratin 18 pseudogene 1 |
6p21.3 |
8824804
|
3879 |
pseudogene |
03/02/1998
|
|
LPAL2 |
lipoprotein, Lp(a)-like 2 |
6q26-q27 |
7679504
|
4020 |
gene |
12/12/1994
|
|
MAP6 |
microtubule-associated protein 6 |
11q13.3 |
10516426
|
4135 |
gene |
26/02/1998
|
|
MICC |
MHC class I polypeptide-related sequence C |
6p21.3 |
8022771
|
4278 |
pseudogene |
07/09/1994
|
|
MICD |
MHC class I polypeptide-related sequence D |
6p21.3 |
8022771
|
4279 |
pseudogene |
07/09/1994
|
|
MICE |
MHC class I polypeptide-related sequence E |
6p21.3 |
|
4280 |
pseudogene |
07/09/1994
|
|
MSNL2 |
moesin-like 2 |
6pter-6qter |
|
4480 |
gene |
15/07/1993
|
|
MYL8P |
myosin, light polypeptide 8, pseudogene |
6p21.3 |
9545376
|
54717 |
pseudogene |
19/07/2000
|
|
NUFIP1P |
nuclear fragile X mental retardation protein interacting protein 1 pseudogene |
6q12 |
10894927
|
89761 |
pseudogene |
06/03/2000
|
|
PHBP1 |
prohibitin pseudogene 1 |
6q25 |
8244394
|
5246 |
pseudogene |
04/11/1993
|
|
PPIP9 |
peptidylprolyl isomerase (cyclophilin) pseudogene 9 |
6p21.3 |
8824804
|
5491 |
pseudogene |
03/02/1998
|
|
FRK |
fyn-related kinase (previous symbol PTK5) |
6pter-6qter |
|
5752 |
gene |
02/10/1992
|
|
RN7SK |
RNA, 7SK, nuclear |
6 |
8139910
|
6028 |
gene |
11/07/1994
|
|
RPL23AP1 |
ribosomal protein L23a pseudogene 1 |
6p21.3 |
8662070
|
6148 |
pseudogene |
23/12/1997
|
|
RPS5P1 |
ribosomal protein S5 pseudogene 1 |
6q22.1-22.3 |
|
26516 |
pseudogene |
07/12/1999
|
|
SLC17A5 |
solute carrier family 17 (anion/sugar transporter), member 5 (previous symbol SIASD) |
6q14-q15 |
8198127
|
6479 |
gene |
07/12/1994
|
|
SLC25A20P |
solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 pseudogene |
6p12 |
|
789 |
pseudogene |
27/10/1997
|
|
TCTE3 |
t-complex-associated-testis-expressed 3 |
6q27 |
1505969
|
6991 |
|
19/11/1991
|
|
TRAN |
tRNA alanine |
6p22.3-6p21.2 |
|
7154 |
gene |
. |
|
TRM1 |
tRNA methionine 1 |
6p22.3-6p21.2 |
|
7210 |
|
08/05/1995
|
|
TRMI1 |
tRNA methionine initiator 1 |
6p23-q12 |
|
7212 |
|
|
|
TRMI2 |
tRNA methionine initiator 2 |
6p23-q12 |
|
7213 |
|
01/01/1986
|
|
TRR3 |
tRNA arginine (UCG) 3 |
6p22.3-p21.2 |
8661117
|
7232 |
|
08/05/1995
|
The following 10 gene symbols have been withdrawn
|
Approved Symbol |
Gene Name |
Chromosomal Location |
PubMed ID |
Entrez Gene ID |
Locus Type |
Date Approved |
|
HMAA |
monocyte antigen A |
6p21.3 |
|
3143 |
. |
27/06/1988
|
|
HMAB |
monocyte antigen B |
6p21.3 |
|
3144 |
|
27/06/1988
|
|
M6P2 |
membrane component, chromosome 6, polypeptide 2 (identified by monoclonal antibody MARB15) |
6q14-q15 |
|
4073 |
|
25/06/1993
|
|
MSK28 |
antigen identified by monoclonal antibody MG2 |
6q21-qter |
|
4463 |
|
|
|
MSK29 |
antigen identified by monoclonal antibody A42 |
6q12-q15 |
|
4464 |
|
|
|
NRASL3 |
neuroblastoma RAS viral (v-ras) oncogene homolog-like 3 |
6pter-p21 |
|
4896 |
|
24/10/1989
|
|
PCNAL |
proliferating cell nuclear antigen-like |
6pter-p21 |
|
5112 |
|
15/01/1990
|
|
PRIM2B |
primase polypeptide 2B, 58kDa |
6p12-p11.1 |
8530050
|
5559 |
|
26/07/1990
|
|
PUT1 |
polypeptide m44p in lymphocyte membrane |
6 |
|
5815 |
|
|
|
SNRPNP1 |
small nuclear ribonucleoprotein polypeptide N pseudogene 1 |
6pter-p21 |
|
6639 |
pseudogene |
24/08/1992
|
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