Virtual Gene Nomenclature Workshop Chromosome 5
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There were 51genes without sequence on this chromosome, there are now 12. Many thanks to all who helped with the genes on this chromosome.
Please email the Nomenclature Editor Varsha Khodiyar for further information.
Link Back to The Virtual Gene Nomenclature Workshop
The following 12 loci have no sequence available, some of these have been given an alternative classification.
|
Approved Symbol |
Gene Name |
Chromosomal Location |
PubMed ID |
Entrez Gene ID |
Locus Type |
Date Approved |
| CHR |
chromate resistance; sulfate transport |
5q35 |
1125 |
gene |
||
| FEB4 | febrile convulsions 4 | 5q14-q15 | 10587582 | 26282 | phenotype only |
19/11/1999 |
| FRA5A | fragile site, BrdU type, common, fra(5)(p13) | 5p13 | 2393 | region |
||
| FRA5B | fragile site, BrdU type, common, fra(5)(q15) | 5q15 | 2394 | region |
||
| FRA5C | fragile site, aphidicolin type, common, fra(5)(q31.1) | 5q31.1 | 2396 | region |
||
| FRA5D | fragile site, aphidicolin type, common, fra(5)(q15) | 5q15 | 2397 | region |
||
| FRA5E | fragile site, aphidicolin type, common, fra(5)(p14) | 5p14 | 2398 | region |
31/08/1988 |
|
| FRA5F | fragile site, aphidicolin type, common, fra(5)(q21) | 5q21 | 2399 | region |
31/08/1988 |
|
| FRA5G | fragile site, folic acid type, rare, fra(5)(q35) | 5q35 | 2213847 | 2400 | region |
24/08/1992 |
| IBD5 | inflammatory bowel disease 5 | 5q31-q33 | 10777714 | 50941 | phenotype only | 05/05/2000 |
| IGES |
immunoglobulin E concentration, serum |
5q31.1 |
8178175 |
3478 |
phenotype only |
20/07/1994 |
| MLVI2 |
Moloney murine leukemia virus (MoMuLV) integration site 2 homolog |
5p14-p13 |
4309 |
region |
The following 34 genes now have sequence data associated.
| Approved Symbol | Gene Name | Chromosomal Location | PubMed ID | Entrez Gene ID | Locus Type | Date Approved | Accession ID |
| ACTBP2 |
actin, beta pseudogene 2 |
5 |
62 |
pseudogene |
01/01/1986 |
AC035147 |
|
| ACTBP4 |
actin, beta pseudogene 4 |
5 |
64 |
pseudogene |
AC008695 |
||
| ADCY2 | adenylate cyclase 2 (brain) | 5p15.3 | 1427768 | 108 | 11/02/1993 | AB028983 | |
| ASSP9 |
argininosuccinate synthetase pseudogene 9 |
5q11-q12 |
6093508 |
454 |
pseudogene |
AC025175 |
|
| ASSP10 | argininosuccinate synthetase pseudogene |
105q13-q23 |
6093508 |
455 |
pseudogene |
AC132803 |
|
| C5orf1 |
chromosome 5 open reading frame 1 |
5p13 |
9722947 |
23738 |
01/10/1998 |
AC025449 |
|
| CTNNAP1 |
catenin (cadherin-associated protein), alpha pseudogene 1 |
5q22 |
7601473 |
1498 |
pseudogene |
10/01/1995 |
Z37994 |
| DBIL1 |
diazepam binding inhibitor-like 1 |
5 |
1623 |
24/07/1991 |
AC008434 |
||
| EBF | early B-cell factor | 5q34 | 8012110 | 1879 | 23/11/1995 | AF208502 | |
| EEF1AL11 |
eukaryotic translation elongation factor 1 alpha-like 11 |
5p12-q11.1 |
8812466 |
1929 |
15/08/1995 |
AC010627 |
|
| EEF1B3 |
eukaryotic translation elongation factor 1 beta 3 |
5q12-q14 |
8250921 |
1934 |
11/03/1991 |
L26404 |
|
| ERPL2 |
endogenous retroviral pol gene-like sequence 2 |
5 |
2083 |
AC112175 |
|||
| FTHL10 |
ferritin, heavy polypeptide-like 10 |
5 |
3862645 |
2502 |
AC026785 |
||
| GAPDL16 |
glyceraldehyde-3-phosphate dehydrogenase-like 16 |
5q33.1-q35.3 |
2613 |
AC108112 |
|||
| GJA1P1 |
gap junction protein, alpha 1, 43kDa (connexin 43) pseudogene 1 |
5 |
2698 |
pseudogene |
30/01/1991 |
AC010228 |
|
| GLULL1 |
glutamate-ammonia ligase (glutamine synthase)-like 1 |
5q33 |
2753 |
24/09/1996 |
AC091982 |
||
| HPRTP2 | hypoxanthine phosphoribosyltransferase pseudogene 2 | 5p14-p13 | 3254 | pseudogene | AC114300 |
||
| HSPA4 | heat shock 70kDa protein 4 | 5q31.1-q31.2 | 8335910 | 3308 | 26/07/1991 | AB023420 | |
| ITGA1 |
integrin, alpha 1 |
5q11.1 |
3672 |
27/02/1992 |
X68742 |
||
| MSNL1 |
moesin-like 1 |
5pter-5qter |
4479 |
15/07/1993 |
AC109469 |
||
| PCDHACT | protocadherin alpha constant | 5q31 | 10380929 | 56119 | 28/06/2000 | AC010223 |
|
| PCDHGCT |
protocadherin gamma constant |
5q31 |
10380929 |
56118 |
28/06/2000 |
AC005366 |
|
| PIGFP1 |
phosphatidylinositol glycan, class F, pseudogene 1 |
5q35 |
8575782 |
5282 |
pseudogene |
20/12/1996 |
D49727, NG_001176 |
| PIK3R1 |
phosphoinositide-3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) |
5q12-q13 |
1314371 |
5295 |
08/12/1992 |
M61906 |
|
| RASGRF2 | Ras protein-specific guanine nucleotide-releasing factor 2 | 5q13 | 9027497 | 5924 | 20/12/1996 | AF023130 | |
| RPS17P2 |
ribosomal protein S17 pseudogene 2 |
5q33-qter |
6219 |
pseudogene |
01/01/1986 |
AC091986 |
|
| RPS20P3 |
ribosomal protein S20 pseudogene 3 |
5q13-q23 |
3459254 |
6225 |
pseudogene |
AC133134 |
|
| RPS20P4 |
ribosomal protein S20 pseudogene 4 |
5q33-qter |
6226 |
pseudogene |
AC011406 |
||
| TCP1L2 |
t-complex 1-like 2 |
5 |
6952 |
AC008817 |
|||
| TRP3 |
tRNA proline (UGG) 3 |
5q35.3 |
7219 |
24/02/1990 |
M27835 |
||
| TRT1 |
tRNA threonine (UGU) 1 |
5q35.3 |
7236 |
24/02/1990 |
M27834 |
||
| TRV1 |
tRNA valine 1 |
5 |
7239 |
24/02/1990 |
M33940 |
||
| U2AFBPL | U2(RNU2) small nuclear RNA auxillary factor binding protein-like | 5q23-5q31 | 7310 | 13/07/1994 | NM_005083 |
||
| XBPP1 | X-box binding protein pseudogene 1 | 5 | 1718857 | 7495 | pseudogene | 11/07/1991 | AC008536 |
The following 5 gene symbols have been withdrawn.
|
Approved Symbol |
Gene Name |
Chromosomal Location |
PubMed ID |
Entrez Gene ID |
Locus Type |
Date Approved |
|
AVRR |
antiviral state repressor regulator |
5p |
556 |
|||
| MSK11 |
antigen identified by monoclonal antibody SR84 |
5 |
4449 |
|||
| NFIXL3 |
nuclear factor I/X-like 3 |
5q15 |
8340106 |
4787 |
03/11/1993 |
|
| PCH2 |
protein spot in 2-D gels 250kDa |
5 |
5102 |
|||
| XRCC4L |
X-ray repair complementing defective repair in Chinese hamster cells 4-like |
5q13-q14 |
7665176 |
7519 |
29/07/1993 |
Link Back to The Virtual Gene Nomenclature Workshop
| Maintained by hgnc@genenames.org | Last updated: September 2003 |
