Virtual Gene Nomenclature Workshop
Chromosome Four

There were 46 genes without sequence on this chromosome, there are now 12.  Many thanks to all who helped with the genes on this chromosome.

Please email the Nomenclature Editor Varsha Khodiyar for further information.

Link Back to The Virtual Gene Nomenclature Workshop


The following 12 loci have no sequence available, some of these have been given an alternative classification.

Approved Symbol

Gene Name

Chromosomal Location

PubMed ID

Entrez Gene ID

Locus Type

Date Approved

ADH5P1

alcohol dehydrogenase 5 (class III), chi polypeptide, pseudogene 1

4q21-q23


129

pseudogene

10/09/1990

ASMD

anterior segment mesenchymal dysgenesis

4q

 

437

phenotype only

31/08/1988

FRA4A

fragile site, aphidicolin type, common, fra(4)(p16.1)

4p16.1

 

2388

 region


FRA4B

fragile site, BrdU type, common, fra(4)(q12)

4q12

 

2389

region

FRA4C

fragile site, aphidicolin type, common, fra(4)(q31.1)

4q31.1

 

2390

region

FRA4D

fragile site, aphidicolin type, common, fra(4)(p15)

4p15

 

2391

region

FRA4E

fragile site, unclassified, common, fra(4)(q27)

4q27

 

2392

region

HCL2

hair color 2 (red)

4q

 

3057

 phenotype only 


HVBS6

hepatitis B virus integration site 6

4q32


3368

region

11/05/1988

JPD

juvenile periodontitis

4

 

3722

phenotype only 

31/08/1988

PEE1

preeclampsia/eclampsia 1

4q25-qter

9150163

5177

 phenotype only

12/09/1997


SF

Stoltzfus blood group

4q

6420
phenotype only 01/01/1986


The following 32 genes now have sequence data associated.

Approved Symbol

Gene Name

Chromosomal Location

PubMed ID

Entrez Gene ID

Locus Type

Date Approved

Accession ID
ANXA2P1 annexin A2 pseudogene 1 4q21-q31 1611909 303 pseudogene
M62896
APBB2
amyloid beta (A4) precursor protein-binding, family B, member 2 (Fe65-like)
4p13
8955346
323

25/06/1997
U62325
ASSP8
argininosuccinate synthetase pseudogene 8
4q21-qter
6093508
453
pseudogene

AC093881
ATP5EP1 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 1 4q25 10727396 23744 pseudogene 07/09/1999 AF277095
CLDN21 claudin 21 4q35.1

53843
19/05/2000 XM_210581
CLDN22 claudin 22

53842
19/05/2000 AK098064

COX5BL1

cytochrome c oxidase subunit Vb-like 1

4cen-q31


1330

06/06/1991

AC021863

COX7A3

cytochrome c oxidase subunit VIIa polypeptide 3 (liver)

4q23

1327965

1348

29/01/1993

AC004544
FDH

formaldehyde dehydrogenase

4q21-q25


2223



merged into ADH5

GABRG1

gamma-aminobutyric acid (GABA) A receptor, gamma 1

4p12

1321425

2565


09/07/1991

BC031087

GAPDL4

glyceraldehyde-3-phosphate dehydrogenase-like 4

4

2601


AC092658
GKP3 glycerol kinase pseudogene 3 4q32.1 7987308 2713 pseudogene 14/12/1994 NG_000861

GLDCP

glycine dehydrogenase (decarboxylase) pseudogene

4q12

7945295

2732

pseudogene

09/12/1994

AC108215

GNPTA

glucosamine (UDP-N-acetyl)-lysosomal-enzyme N-acetylglucosamine phosphotransferase (mucolipidoses II & III)

4q21-q23


2795


01/01/1986

Data reserved
GTA
galactosyltransferase activator 4

2955


M14624

GTF2F2L

general transcription factor IIF, polypeptide 2-like

4q31

2964

26/07/1994

AC093908
HADHAP hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase pseudogene (gastrin binding protein pseudogene) 4q32
7918661
3031
pseudogene 16/12/1994 U04628, NG_000863

HSPCAL2

heat shock 90kDa protein 1, alpha-like 2

4q35

1740332

3323


17/09/1991

AC020698

HSPCP1

heat shock 90kDa protein 1, beta pseudogene 1

4q21-q25

8288256

3327

pseudogene

14/03/1996

AC093768

LDHAL1

lactate dehydrogenase A-like 1

4pter-p15.3


3940


AC092437
MT2P1 metallothionein 2 pseudogene 1 (processed) 4p11-q21
4503 pseudogene
J00272, NG_001158

NT5C3P1

5'-nucleotidase, cytosolic III pseudogene 1

4

11369620

90859

pseudogene

18/04/2002

AC092661
PEPS
peptidase S 4p11-q12
5186
01/01/1986 merged into LAP3
PGM2 phosphoglucomutase 2 4p14-q12
5237

NM_018290

PPBPL1

pro-platelet basic protein-like 1 (includes platelet basic protein, beta-thromboglobulin, connective tissue-activating peptide III, neutrophil-activating peptide-2-like 1)

4q12-q13

1316786

5474


21/10/1991

AC093677
PPP2R2C protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform 4p16

5522

25/01/1993 AF086924

PTK4

PTK4 protein tyrosine kinase 4

4p12

7528718

5751

 

02/10/1992

merged into TXK

RAF1P1

v-raf-1 murine leukemia viral oncogene homolog 1 pseudogene 1

4p16.1

 

5895

pseudogene

01/01/1986

AC006499

SEN1

senescence (cellular)-related 1

4

2062841

6408

 

19/08/1991

merged into MORF4

SRIL

sorcin-like

4

6644

15/05/1989

AC096725

TMSL3

thymosin-like 3

4

7117

18/06/1990


AC019188

TYRO4

TYRO4 protein tyrosine kinase

4q13

7528718

7304

 

02/10/1992

merged into EPHA5

The following 2 gene symbols have been withdrawn.

Approved Symbol

Gene Name

Chromosomal Location

PubMed ID

Entrez Gene ID

Locus Type

Date Approved

ASVS1

adenovirus/SV40 integration site 1

4p16.2


461

12/09/1991

MDF1

antigen identified by monoclonal antibody A-3A4

4

4187



Thanks to Youla Karavidopoulos, Richard Spritz, Olivia Smith, Tim Bonnert and Uta Francke for their help with the genes on this chromosome.



Link Back to The Virtual Gene Nomenclature Workshop
 
Maintained by hgnc@genenames.org Last updated: October 2003